HL_5U9F_035

3D structure

PDB id

5U9F (explore in PDB, NAKB, or RNA 3D Hub)

Description

3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GCGACGGUUGUC

Length

12 nucleotides

Bulged bases

5U9F|1|01|A|1453, 5U9F|1|01|C|1454, 5U9F|1|01|U|1460

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5U9F|1|01|G|1450
5U9F|1|01|C|1451
5U9F|1|01|G|1452
5U9F|1|01|A|1453
5U9F|1|01|C|1454
5U9F|1|01|G|1455
5U9F|1|01|G|1456
5U9F|1|01|U|1457
5U9F|1|01|U|1458
5U9F|1|01|G|1459
5U9F|1|01|U|1460
5U9F|1|01|C|1461

Current chains

Chain 01

23S ribosomal RNA

Nearby chains

Chain 16

50S ribosomal protein L17