HL_5U9F_075
3D structure
- PDB id
- 5U9F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CCUUCGGG
- Length
- 8 nucleotides
- Bulged bases
- 5U9F|1|A|U|209
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5U9F_075 not in the Motif Atlas
- Geometric match to HL_4YAZ_004
- Geometric discrepancy: 0.3365
- The information below is about HL_4YAZ_004
- Detailed Annotation
- Mini UNCG
- Broad Annotation
- No text annotation
- Motif group
- HL_90436.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 37
Unit IDs
5U9F|1|A|C|206
5U9F|1|A|C|207
5U9F|1|A|U|208
5U9F|1|A|U|209
5U9F|1|A|C|210
5U9F|1|A|G|211
5U9F|1|A|G|212
5U9F|1|A|G|213
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: