HL_5UQ7_013
3D structure
- PDB id
- 5UQ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome complex with dnaX mRNA stemloop and E-site tRNA ('in' conformation)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GUUCGUGGAGC
- Length
- 11 nucleotides
- Bulged bases
- 5UQ7|1|A|G|386
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5UQ7_013 not in the Motif Atlas
- Homologous match to HL_7RQB_013
- Geometric discrepancy: 0.138
- The information below is about HL_7RQB_013
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_91503.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
5UQ7|1|A|G|382
5UQ7|1|A|U|383
5UQ7|1|A|U|384
5UQ7|1|A|C|385
5UQ7|1|A|G|386
5UQ7|1|A|U|387
5UQ7|1|A|G|388
5UQ7|1|A|G|389
5UQ7|1|A|A|390
5UQ7|1|A|G|391
5UQ7|1|A|C|392
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 1
- 50S ribosomal protein L28
- Chain P
- 50S ribosomal protein L15
Coloring options: