HL_5UYK_026
3D structure
- PDB id
- 5UYK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GAAACAAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5UYK_026 not in the Motif Atlas
- Homologous match to HL_4WF9_028
- Geometric discrepancy: 0.197
- The information below is about HL_4WF9_028
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_42998.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
5UYK|1|01|G|978
5UYK|1|01|A|979
5UYK|1|01|A|980
5UYK|1|01|A|981
5UYK|1|01|C|982
5UYK|1|01|A|983
5UYK|1|01|A|984
5UYK|1|01|C|985
Current chains
- Chain 01
- 23S ribosomal RNA
Nearby chains
- Chain 19
- 50S ribosomal protein L20
- Chain 20
- 50S ribosomal protein L21
- Chain 28
- 50S ribosomal protein L30
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