HL_5UYK_027

3D structure

PDB id

5UYK (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome bound with cognate ternary complex not base-paired to A site codon (Structure I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GGCUUAGAAGCAGCC

Length

15 nucleotides

Bulged bases

5UYK|1|01|U|1066, 5UYK|1|01|A|1070

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5UYK|1|01|G|1062
5UYK|1|01|G|1063
5UYK|1|01|C|1064
5UYK|1|01|U|1065
5UYK|1|01|U|1066
5UYK|1|01|A|1067
5UYK|1|01|G|1068
5UYK|1|01|A|1069
5UYK|1|01|A|1070
5UYK|1|01|G|1071
5UYK|1|01|C|1072
5UYK|1|01|A|1073
5UYK|1|01|G|1074
5UYK|1|01|C|1075
5UYK|1|01|C|1076

Current chains

Chain 01

23S ribosomal RNA

Nearby chains

Chain 11

50S ribosomal protein L11

Chain 15

50S ribosomal protein L16

Chain Y

Transfer RNA; tRNA