HL_5UYQ_053
3D structure
- PDB id
- 5UYQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome bound with near-cognate ternary complex base-paired to A site codon, closed 30S (Structure III-nc)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CUAAAGAGUAACG
- Length
- 13 nucleotides
- Bulged bases
- 5UYQ|1|01|A|2268, 5UYQ|1|01|C|2275
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5UYQ_053 not in the Motif Atlas
- Homologous match to HL_4WF9_050
- Geometric discrepancy: 0.1127
- The information below is about HL_4WF9_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_02042.1
- Basepair signature
- cWW-tSH-tHH-tWW-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
5UYQ|1|01|C|2264
5UYQ|1|01|U|2265
5UYQ|1|01|A|2266
5UYQ|1|01|A|2267
5UYQ|1|01|A|2268
5UYQ|1|01|G|2269
5UYQ|1|01|A|2270
5UYQ|1|01|G|2271
5UYQ|1|01|U|2272
5UYQ|1|01|A|2273
5UYQ|1|01|A|2274
5UYQ|1|01|C|2275
5UYQ|1|01|G|2276
Current chains
- Chain 01
- 23S ribosomal RNA
Nearby chains
- Chain 15
- 50S ribosomal protein L16
- Chain 25
- 50S ribosomal protein L27
Coloring options: