HL_5V93_027

3D structure

PDB id

5V93 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome from Mycobacterium tuberculosis bound with Capreomycin

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CCGAUGGGUUACUGACG

Length

17 nucleotides

Bulged bases

5V93|1|A|A|1025

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5V93|1|A|C|1005
5V93|1|A|C|1006
5V93|1|A|G|1007
5V93|1|A|A|1008
5V93|1|A|U|1009
5V93|1|A|G|1010
5V93|1|A|G|1011
5V93|1|A|G|1012
5V93|1|A|U|1023
5V93|1|A|U|1024
5V93|1|A|A|1025
5V93|1|A|C|1026
5V93|1|A|U|1027
5V93|1|A|G|1028
5V93|1|A|A|1029
5V93|1|A|C|1030
5V93|1|A|G|1031

Current chains

Chain A

23S rRNA

Nearby chains

Chain M

50S ribosomal protein L16

Chain V

50S ribosomal protein L25