HL_5V93_035

3D structure

PDB id

5V93 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome from Mycobacterium tuberculosis bound with Capreomycin

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GCCAGGCCAGUCCGC

Length

15 nucleotides

Bulged bases

5V93|1|A|C|1456, 5V93|1|A|U|1460, 5V93|1|A|G|1463

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5V93|1|A|G|1450
5V93|1|A|C|1451
5V93|1|A|C|1452
5V93|1|A|A|1453
5V93|1|A|G|1454
5V93|1|A|G|1455
5V93|1|A|C|1456
5V93|1|A|C|1457
5V93|1|A|A|1458
5V93|1|A|G|1459
5V93|1|A|U|1460
5V93|1|A|C|1461
5V93|1|A|C|1462
5V93|1|A|G|1463
5V93|1|A|C|1464

Current chains

Chain A

23S rRNA

Nearby chains

Chain N

50S ribosomal protein L17

Chain S

50S ribosomal protein L22

Chain T

50S ribosomal protein L23