HL_5V93_109

3D structure

PDB id

5V93 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the 70S ribosome from Mycobacterium tuberculosis bound with Capreomycin

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GGUUGGCUUAGAAGCAGCCACCC

Length

23 nucleotides

Bulged bases

5V93|1|A|U|1190, 5V93|1|A|A|1196, 5V93|1|A|A|1199, 5V93|1|A|C|1207

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5V93|1|A|G|1187
5V93|1|A|G|1188
5V93|1|A|U|1189
5V93|1|A|U|1190
5V93|1|A|G|1191
5V93|1|A|G|1192
5V93|1|A|C|1193
5V93|1|A|U|1194
5V93|1|A|U|1195
5V93|1|A|A|1196
5V93|1|A|G|1197
5V93|1|A|A|1198
5V93|1|A|A|1199
5V93|1|A|G|1200
5V93|1|A|C|1201
5V93|1|A|A|1202
5V93|1|A|G|1203
5V93|1|A|C|1204
5V93|1|A|C|1205
5V93|1|A|A|1206
5V93|1|A|C|1207
5V93|1|A|C|1208
5V93|1|A|C|1209

Current chains

Chain A

23S rRNA

Nearby chains

Chain M

50S ribosomal protein L16