HL_5VPO_058

3D structure

PDB id

5VPO (explore in PDB, NAKB, or RNA 3D Hub)

Description

The 70S P-site ASL SufA6 complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.34 Å

Loop

Sequence

UUUAGG

Length

6 nucleotides

Bulged bases

5VPO|1|RA|U|827, 5VPO|1|RA|G|830

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5VPO_058 not in the Motif Atlas

Homologous match to HL_5J7L_157

Geometric discrepancy: 0.0846

The information below is about HL_5J7L_157

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_55195.3

Basepair signature

cWW-F

Number of instances in this motif group

6

Unit IDs

5VPO|1|RA|U|826
5VPO|1|RA|U|827
5VPO|1|RA|U|828
5VPO|1|RA|A|829
5VPO|1|RA|G|830
5VPO|1|RA|G|831

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RP

50S ribosomal protein L15