HL_5VPO_214

3D structure

PDB id

5VPO (explore in PDB, NAKB, or RNA 3D Hub)

Description

The 70S P-site ASL SufA6 complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.34 Å

Loop

Sequence

GCCCACCAGC

Length

10 nucleotides

Bulged bases

5VPO|1|RA|C|885, 5VPO|1|RA|C|886, 5VPO|1|RA|A|887, 5VPO|1|RA|C|888

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5VPO|1|RA|G|883
5VPO|1|RA|C|884
5VPO|1|RA|C|885
5VPO|1|RA|C|886
5VPO|1|RA|A|887
5VPO|1|RA|C|888
5VPO|1|RA|C|889
5VPO|1|RA|A|890
5VPO|1|RA|G|892
5VPO|1|RA|C|893

Current chains

Chain RA

23S rRNA

Nearby chains

Chain QM

30S ribosomal protein S13

Chain QS

30S ribosomal protein S19