HL_5VPP_028
3D structure
- PDB id
- 5VPP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The 70S P-site tRNA SufA6 complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.9 Å
Loop
- Sequence
- GGCAAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5VPP_028 not in the Motif Atlas
- Homologous match to HL_6CZR_099
- Geometric discrepancy: 0.2543
- The information below is about HL_6CZR_099
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5VPP|1|QA|G|1265
5VPP|1|QA|G|1266
5VPP|1|QA|C|1267
5VPP|1|QA|A|1268
5VPP|1|QA|A|1269
5VPP|1|QA|C|1270
Current chains
- Chain QA
- 16S rRNA
Nearby chains
- Chain QM
- 30S ribosomal protein S13
- Chain QS
- 30S ribosomal protein S19
Coloring options: