HL_5VPP_114

3D structure

PDB id

5VPP (explore in PDB, NAKB, or RNA 3D Hub)

Description

The 70S P-site tRNA SufA6 complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.9 Å

Loop

Sequence

GCACUGAGACACGGGC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5VPP|1|XA|G|319
5VPP|1|XA|C|320
5VPP|1|XA|A|321
5VPP|1|XA|C|322
5VPP|1|XA|U|323
5VPP|1|XA|G|324
5VPP|1|XA|A|325
5VPP|1|XA|G|326
5VPP|1|XA|A|327
5VPP|1|XA|C|328
5VPP|1|XA|A|329
5VPP|1|XA|C|330
5VPP|1|XA|G|331
5VPP|1|XA|G|332
5VPP|1|XA|G|333
5VPP|1|XA|C|334

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XT

30S ribosomal protein S20