HL_5W1H_001

3D structure

PDB id

5W1H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of LbaCas13a (C2c2) bound to mature crRNA (24-nt spacer)

Experimental method

X-RAY DIFFRACTION

Resolution

1.99 Å

Loop

Sequence

CAAGAAAGAG

Length

10 nucleotides

Bulged bases

5W1H|1|B|A|-14

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_73268.1

Basepair signature

cWW-F-F-cSS-cSS-F

Number of instances in this motif group

4

Unit IDs

5W1H|1|B|C|-19
5W1H|1|B|A|-18
5W1H|1|B|A|-17
5W1H|1|B|G|-16
5W1H|1|B|A|-15
5W1H|1|B|A|-14
5W1H|1|B|A|-13
5W1H|1|B|G|-12
5W1H|1|B|A|-11
5W1H|1|B|G|-10

Current chains

Chain B

mature crRNA

Nearby chains

Chain A

LbaCas13a (C2c2)