HL_5W4K_137

3D structure

PDB id

5W4K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

GGCCCACCAGCC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5W4K|1|2A|G|882
5W4K|1|2A|G|883
5W4K|1|2A|C|884
5W4K|1|2A|C|885
5W4K|1|2A|C|886
5W4K|1|2A|A|887
5W4K|1|2A|C|888
5W4K|1|2A|C|889
5W4K|1|2A|A|890
5W4K|1|2A|G|892
5W4K|1|2A|C|893
5W4K|1|2A|C|894

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2m

30S ribosomal protein S13

Chain 2w

Transfer RNA; tRNA