HL_5WDT_006
3D structure
- PDB id
- 5WDT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome-EF-Tu H84A complex with GppNHp
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GAAACAUC
- Length
- 8 nucleotides
- Bulged bases
- 5WDT|1|A|A|196
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5WDT_006 not in the Motif Atlas
- Homologous match to HL_7RQB_006
- Geometric discrepancy: 0.0881
- The information below is about HL_7RQB_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06192.2
- Basepair signature
- cWW-tSH-F-F
- Number of instances in this motif group
- 14
Unit IDs
5WDT|1|A|G|194
5WDT|1|A|A|195
5WDT|1|A|A|196
5WDT|1|A|A|197
5WDT|1|A|C|198
5WDT|1|A|A|199
5WDT|1|A|U|200
5WDT|1|A|C|201
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain L
- 50S ribosomal protein L15
- Chain X
- 50S ribosomal protein L28
- Chain w
- Transfer RNA; tRNA
Coloring options: