HL_5WDT_087

3D structure

PDB id

5WDT (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GppNHp

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCCUUGAGG

Length

9 nucleotides

Bulged bases

5WDT|1|a|C|841, 5WDT|1|a|U|842, 5WDT|1|a|U|843, 5WDT|1|a|G|844, 5WDT|1|a|A|845

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WDT|1|a|C|839
5WDT|1|a|C|840
5WDT|1|a|C|841
5WDT|1|a|U|842
5WDT|1|a|U|843
5WDT|1|a|G|844
5WDT|1|a|A|845
5WDT|1|a|G|846
5WDT|1|a|G|847

Current chains

Chain a

16S rRNA

Nearby chains

Chain b

30S ribosomal protein S2

Chain r

30S ribosomal protein S18