HL_5WDT_113

3D structure

PDB id

5WDT (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GppNHp

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGAGGCACUACGGUGCUGAAG

Length

21 nucleotides

Bulged bases

5WDT|1|A|A|1535, 5WDT|1|A|C|1536

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WDT|1|A|C|1526
5WDT|1|A|G|1527
5WDT|1|A|A|1528
5WDT|1|A|G|1529
5WDT|1|A|G|1530
5WDT|1|A|C|1531
5WDT|1|A|A|1532
5WDT|1|A|C|1533
5WDT|1|A|U|1534
5WDT|1|A|A|1535
5WDT|1|A|C|1536
5WDT|1|A|G|1537
5WDT|1|A|G|1538
5WDT|1|A|U|1539
5WDT|1|A|G|1540
5WDT|1|A|C|1541
5WDT|1|A|U|1542
5WDT|1|A|G|1543
5WDT|1|A|A|1544
5WDT|1|A|A|1545
5WDT|1|A|G|1546

Current chains

Chain A

23S rRNA

Nearby chains

Chain T

50S ribosomal protein L23