HL_5WE4_048

3D structure

PDB id

5WE4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu wt complex with GppNHp

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUG(6MZ)AGAUGC

Length

10 nucleotides

Bulged bases

5WE4|1|A|A|2031, 5WE4|1|A|G|2032

QA status

Modified nucleotides: 6MZ

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5WE4_048 not in the Motif Atlas

Homologous match to HL_5J7L_183

Geometric discrepancy: 0.0938

The information below is about HL_5J7L_183

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_61996.3

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

7

Unit IDs

5WE4|1|A|G|2027
5WE4|1|A|U|2028
5WE4|1|A|G|2029
5WE4|1|A|6MZ|2030
5WE4|1|A|A|2031
5WE4|1|A|G|2032
5WE4|1|A|A|2033
5WE4|1|A|U|2034
5WE4|1|A|G|2035
5WE4|1|A|C|2036

Current chains

Chain A

23S rRNA

Nearby chains

Chain 0

50S ribosomal protein L32

Chain D

50S ribosomal protein L3

Chain Q

50S ribosomal protein L20

Chain R

50S ribosomal protein L21