3D structure

PDB id
5WE4 (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome-EF-Tu wt complex with GppNHp
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
CCUUGAG
Length
7 nucleotides
Bulged bases
5WE4|1|A|U|2797, 5WE4|1|A|A|2800
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_5WE4_065 not in the Motif Atlas
Homologous match to HL_5J7L_200
Geometric discrepancy: 0.4785
The information below is about HL_5J7L_200
Detailed Annotation
UNCG variation
Broad Annotation
UNCG variation
Motif group
HL_08100.1
Basepair signature
cWW-F-F-F
Number of instances in this motif group
4

Unit IDs

5WE4|1|A|C|2795
5WE4|1|A|C|2796
5WE4|1|A|U|2797
5WE4|1|A|U|2798
5WE4|1|A|G|2799
5WE4|1|A|A|2800
5WE4|1|A|G|2801

Current chains

Chain A
23S rRNA

Nearby chains

Chain J
50S ribosomal protein L13

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.1083 s