HL_5WE4_091

3D structure

PDB id

5WE4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu wt complex with GppNHp

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AGAGAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5WE4_091 not in the Motif Atlas

Homologous match to HL_4LFB_022

Geometric discrepancy: 0.2427

The information below is about HL_4LFB_022

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.3

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

397

Unit IDs

5WE4|1|a|A|1012
5WE4|1|a|G|1013
5WE4|1|a|A|1014
5WE4|1|a|G|1015
5WE4|1|a|A|1016
5WE4|1|a|U|1017

Current chains

Chain a

16S rRNA

Nearby chains

Chain n

30S ribosomal protein S14

Chain s

30S ribosomal protein S19