HL_5WE4_094

3D structure

PDB id

5WE4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu wt complex with GppNHp

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUCCGGC

Length

7 nucleotides

Bulged bases

5WE4|1|a|C|1136, 5WE4|1|a|G|1139

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5WE4_094 not in the Motif Atlas

Homologous match to HL_5J7L_025

Geometric discrepancy: 0.1956

The information below is about HL_5J7L_025

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87954.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

7

Unit IDs

5WE4|1|a|G|1134
5WE4|1|a|U|1135
5WE4|1|a|C|1136
5WE4|1|a|C|1137
5WE4|1|a|G|1138
5WE4|1|a|G|1139
5WE4|1|a|C|1140

Current chains

Chain a

16S rRNA

Nearby chains

Chain i

30S ribosomal protein S9