HL_5WE4_103
3D structure
- PDB id
- 5WE4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome-EF-Tu wt complex with GppNHp
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- G(5MU)(PSU)CAAAUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: 5MU, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5WE4_103 not in the Motif Atlas
- Homologous match to HL_6CFJ_108
- Geometric discrepancy: 0.0995
- The information below is about HL_6CFJ_108
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_28252.8
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 140
Unit IDs
5WE4|1|v|G|53
5WE4|1|v|5MU|54
5WE4|1|v|PSU|55
5WE4|1|v|C|56
5WE4|1|v|A|57
5WE4|1|v|A|58
5WE4|1|v|A|59
5WE4|1|v|U|60
5WE4|1|v|C|61
Current chains
- Chain v
- tRNA-fMet
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain F
- 50S ribosomal protein L5
- Chain M
- 50S ribosomal protein L16
Coloring options: