HL_5WE6_066

3D structure

PDB id

5WE6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and cognate tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GAAGACGAC

Length

9 nucleotides

Bulged bases

5WE6|1|A|A|2820

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5WE6_066 not in the Motif Atlas

Homologous match to HL_5J7L_201

Geometric discrepancy: 0.0865

The information below is about HL_5J7L_201

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.6

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

9

Unit IDs

5WE6|1|A|G|2819
5WE6|1|A|A|2820
5WE6|1|A|A|2821
5WE6|1|A|G|2822
5WE6|1|A|A|2823
5WE6|1|A|C|2824
5WE6|1|A|G|2825
5WE6|1|A|A|2826
5WE6|1|A|C|2827

Current chains

Chain A

23S rRNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain N

50S ribosomal protein L17