HL_5WE6_081

3D structure

PDB id

5WE6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and cognate tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

5WE6|1|a|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5WE6_081 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.2267

The information below is about HL_5J7L_012

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

5WE6|1|a|G|462
5WE6|1|a|U|463
5WE6|1|a|U|464
5WE6|1|a|A|465
5WE6|1|a|A|466
5WE6|1|a|U|467
5WE6|1|a|A|468
5WE6|1|a|C|469
5WE6|1|a|C|470

Current chains

Chain a

16S rRNA

Nearby chains