HL_5WF0_022

3D structure

PDB id

5WF0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UGAAAGG

Length

7 nucleotides

Bulged bases

5WF0|1|A|A|781, 5WF0|1|A|G|784

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5WF0_022 not in the Motif Atlas

Geometric match to HL_1P6V_001

Geometric discrepancy: 0.302

The information below is about HL_1P6V_001

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_53890.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

15

Unit IDs

5WF0|1|A|U|779
5WF0|1|A|G|780
5WF0|1|A|A|781
5WF0|1|A|A|782
5WF0|1|A|A|783
5WF0|1|A|G|784
5WF0|1|A|G|785

Current chains

Chain A

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L2