HL_5WF0_096

3D structure

PDB id

5WF0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UGAUAAA

Length

7 nucleotides

Bulged bases

5WF0|1|a|U|1168

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5WF0_096 not in the Motif Atlas

Homologous match to HL_4LFB_027

Geometric discrepancy: 0.3059

The information below is about HL_4LFB_027

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

397

Unit IDs

5WF0|1|a|U|1165
5WF0|1|a|G|1166
5WF0|1|a|A|1167
5WF0|1|a|U|1168
5WF0|1|a|A|1169
5WF0|1|a|A|1170
5WF0|1|a|A|1171

Current chains

Chain a

16S rRNA

Nearby chains

Chain b

30S ribosomal protein S2

Chain u

30S ribosomal protein S21