HL_5WF0_105
3D structure
- PDB id
- 5WF0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CAGCCGG(H2U)AG*G
- Length
- 11 nucleotides
- Bulged bases
- 5WF0|1|w|C|17, 5WF0|1|w|G|18, 5WF0|1|w|G|19
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5WF0_105 not in the Motif Atlas
- Homologous match to HL_4LCK_001
- Geometric discrepancy: 0.2414
- The information below is about HL_4LCK_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5WF0|1|w|C|13
5WF0|1|w|A|14
5WF0|1|w|G|15
5WF0|1|w|C|16
5WF0|1|w|C|17
5WF0|1|w|G|18
5WF0|1|w|G|19
5WF0|1|w|H2U|20
5WF0|1|w|A|21
5WF0|1|w|G|22
*
5WF0|1|w|G|22
Current chains
- Chain w
- tRNA-fMet
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
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