HL_5WFK_023

3D structure

PDB id

5WFK (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UUUAGG

Length

6 nucleotides

Bulged bases

5WFK|1|A|U|827, 5WFK|1|A|G|830

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5WFK_023 not in the Motif Atlas

Homologous match to HL_4WF9_025

Geometric discrepancy: 0.0651

The information below is about HL_4WF9_025

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_27530.1

Basepair signature

cWW-F-F

Number of instances in this motif group

10

Unit IDs

5WFK|1|A|U|826
5WFK|1|A|U|827
5WFK|1|A|U|828
5WFK|1|A|A|829
5WFK|1|A|G|830
5WFK|1|A|G|831

Current chains

Chain A

23S rRNA

Nearby chains

Chain L

50S ribosomal protein L15