HL_5WFK_094

3D structure

PDB id

5WFK (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GUCCGGC

Length

7 nucleotides

Bulged bases

5WFK|1|a|C|1136, 5WFK|1|a|G|1139

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5WFK_094 not in the Motif Atlas

Homologous match to HL_5J7L_025

Geometric discrepancy: 0.1964

The information below is about HL_5J7L_025

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87954.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

7

Unit IDs

5WFK|1|a|G|1134
5WFK|1|a|U|1135
5WFK|1|a|C|1136
5WFK|1|a|C|1137
5WFK|1|a|G|1138
5WFK|1|a|G|1139
5WFK|1|a|C|1140

Current chains

Chain a

16S rRNA

Nearby chains

Chain i

30S ribosomal protein S9