HL_5WFK_119

3D structure

PDB id

5WFK (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CCUUGAG

Length

7 nucleotides

Bulged bases

5WFK|1|A|U|2797, 5WFK|1|A|A|2800

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5WFK_119 not in the Motif Atlas

Homologous match to HL_5J7L_200

Geometric discrepancy: 0.2925

The information below is about HL_5J7L_200

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_08100.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

5WFK|1|A|C|2795
5WFK|1|A|C|2796
5WFK|1|A|U|2797
5WFK|1|A|U|2798
5WFK|1|A|G|2799
5WFK|1|A|A|2800
5WFK|1|A|G|2801

Current chains

Chain A

23S rRNA

Nearby chains