HL_5WFS_038

3D structure

PDB id

5WFS (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGACAC(6MZ)G

Length

8 nucleotides

Bulged bases

5WFS|1|A|A|1614, 5WFS|1|A|A|1616

QA status

Modified nucleotides: 6MZ

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5WFS_038 not in the Motif Atlas

Homologous match to HL_5J7L_173

Geometric discrepancy: 0.0831

The information below is about HL_5J7L_173

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89567.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

8

Unit IDs

5WFS|1|A|C|1612
5WFS|1|A|G|1613
5WFS|1|A|A|1614
5WFS|1|A|C|1615
5WFS|1|A|A|1616
5WFS|1|A|C|1617
5WFS|1|A|6MZ|1618
5WFS|1|A|G|1619

Current chains

Chain A

23S rRNA

Nearby chains

Chain 2

50S ribosomal protein L34

Chain S

50S ribosomal protein L22