HL_5WFS_081

3D structure

PDB id

5WFS (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

5WFS|1|a|U|467

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5WFS_081 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.2097

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

5WFS|1|a|G|462
5WFS|1|a|U|463
5WFS|1|a|U|464
5WFS|1|a|A|465
5WFS|1|a|A|466
5WFS|1|a|U|467
5WFS|1|a|A|468
5WFS|1|a|C|469
5WFS|1|a|C|470

Current chains

Chain a

16S rRNA

Nearby chains