HL_5WFS_113
3D structure
- PDB id
- 5WFS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GGGUAACGGCU
- Length
- 11 nucleotides
- Bulged bases
- 5WFS|1|a|G|266
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5WFS_113 not in the Motif Atlas
- Geometric match to HL_5UD5_001
- Geometric discrepancy: 0.1899
- The information below is about HL_5UD5_001
- Detailed Annotation
- tRNA D-loop
- Broad Annotation
- tRNA D-loop
- Motif group
- HL_89167.2
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 22
Unit IDs
5WFS|1|a|G|258
5WFS|1|a|G|259
5WFS|1|a|G|260
5WFS|1|a|U|261
5WFS|1|a|A|262
5WFS|1|a|A|263
5WFS|1|a|C|264
5WFS|1|a|G|265
5WFS|1|a|G|266
5WFS|1|a|C|267
5WFS|1|a|U|268
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain q
- 30S ribosomal protein S17
- Chain t
- 30S ribosomal protein S20
Coloring options: