HL_5WIS_216
3D structure
- PDB id
- 5WIS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- GG(5MU)(PSU)CGAUUCC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: 5MU, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5WIS_216 not in the Motif Atlas
- Homologous match to HL_4WQ1_225
- Geometric discrepancy: 0.3142
- The information below is about HL_4WQ1_225
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5WIS|1|2w|G|52
5WIS|1|2w|G|53
5WIS|1|2w|5MU|54
5WIS|1|2w|PSU|55
5WIS|1|2w|C|56
5WIS|1|2w|G|57
5WIS|1|2w|A|58
5WIS|1|2w|U|59
5WIS|1|2w|U|60
5WIS|1|2w|C|61
5WIS|1|2w|C|62
Current chains
- Chain 2w
- A-site and E-site tRNAs
Nearby chains
- Chain 2A
- Large subunit ribosomal RNA; LSU rRNA
- Chain 2Q
- 50S ribosomal protein L16
Coloring options: