HL_5WIS_233

3D structure

PDB id

5WIS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

GUUUGAUCCUGGC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WIS|1|2a|G|11
5WIS|1|2a|U|12
5WIS|1|2a|U|13
5WIS|1|2a|U|14
5WIS|1|2a|G|15
5WIS|1|2a|A|16
5WIS|1|2a|U|17
5WIS|1|2a|C|18
5WIS|1|2a|C|19
5WIS|1|2a|U|20
5WIS|1|2a|G|21
5WIS|1|2a|G|22
5WIS|1|2a|C|23

Current chains

Chain 2a

16S Ribosomal RNA

Nearby chains

Chain 2e

30S ribosomal protein S5

Chain 2l

30S ribosomal protein S12

Chain 2v

mRNA