HL_5WLC_029

3D structure

PDB id

5WLC (explore in PDB, NAKB, or RNA 3D Hub)

Description

The complete structure of the small subunit processome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GUCAUCAGC

Length

9 nucleotides

Bulged bases

5WLC|1|L1|U|1595, 5WLC|1|L1|C|1596, 5WLC|1|L1|G|1601

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WLC|1|L1|G|1594
5WLC|1|L1|U|1595
5WLC|1|L1|C|1596
5WLC|1|L1|A|1597
5WLC|1|L1|U|1598
5WLC|1|L1|C|1599
5WLC|1|L1|A|1600
5WLC|1|L1|G|1601
5WLC|1|L1|C|1602

Current chains

Chain L1

18S pre-rRNA

Nearby chains

Chain NA

Mpp10

Chain SI

Bms1

Chain SM

Imp4

Chain ST

Nop14