HL_5WNR_013
3D structure
- PDB id
- 5WNR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- GCAGCC(7MG)C
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: 7MG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5WNR_013 not in the Motif Atlas
- Geometric match to HL_5NFV_001
- Geometric discrepancy: 0.2218
- The information below is about HL_5NFV_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_69752.2
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 7
Unit IDs
5WNR|1|A|G|521
5WNR|1|A|C|522
5WNR|1|A|A|523
5WNR|1|A|G|524
5WNR|1|A|C|525
5WNR|1|A|C|526
5WNR|1|A|7MG|527
5WNR|1|A|C|528
Current chains
- Chain A
- 16S Ribosomal RNA rRNA
Nearby chains
- Chain L
- 30S ribosomal protein S12
Coloring options: