HL_5WQE_001

3D structure

PDB id

5WQE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Alicyclobacillus acidoterrestris C2c1 in complex with single-guide RNA at 3.1 Angstrom resolution

Experimental method

X-RAY DIFFRACTION

Resolution

3.13 Å

Loop

Sequence

UAGA

Length

4 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5WQE_001 not in the Motif Atlas

Geometric match to HL_4L8H_001

Geometric discrepancy: 0.1437

The information below is about HL_4L8H_001

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.4

Basepair signature

cWW-F

Number of instances in this motif group

48

Unit IDs

5WQE|1|B|U|4
5WQE|1|B|A|5
5WQE|1|B|G|6
5WQE|1|B|A|7

Current chains

Chain B

RNA (60-MER)

Nearby chains

Chain A

CRISPR-associated endonuclease C2c1