HL_5XYM_046

3D structure

PDB id

5XYM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Large subunit of Mycobacterium smegmatis

Experimental method

ELECTRON MICROSCOPY

Resolution

3.08 Å

Loop

Sequence

UUAACUGUGAAG

Length

12 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5XYM|1|A|U|2084
5XYM|1|A|U|2085
5XYM|1|A|A|2086
5XYM|1|A|A|2087
5XYM|1|A|C|2088
5XYM|1|A|U|2089
5XYM|1|A|G|2100
5XYM|1|A|U|2101
5XYM|1|A|G|2102
5XYM|1|A|A|2103
5XYM|1|A|A|2104
5XYM|1|A|G|2105

Current chains

Chain A

23S RNA

Nearby chains