HL_5XYU_024

3D structure

PDB id

5XYU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Small subunit of Mycobacterium smegmatis ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.45 Å

Loop

Sequence

CAGCG

Length

5 nucleotides

Bulged bases

5XYU|1|A|C|1112

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5XYU|1|A|C|1109
5XYU|1|A|A|1110
5XYU|1|A|G|1111
5XYU|1|A|C|1112
5XYU|1|A|G|1124

Current chains

Chain A

16S RNA

Nearby chains

Chain I

30S ribosomal protein S9

Chain J

30S ribosomal protein S10