HL_5XYU_030

3D structure

PDB id

5XYU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Small subunit of Mycobacterium smegmatis ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.45 Å

Loop

Sequence

UGUAGCGGUGGAAUGCGCAGAUA

Length

23 nucleotides

Bulged bases

5XYU|1|A|A|682, 5XYU|1|A|G|683

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5XYU|1|A|U|664
5XYU|1|A|G|665
5XYU|1|A|U|666
5XYU|1|A|A|667
5XYU|1|A|G|668
5XYU|1|A|C|669
5XYU|1|A|G|670
5XYU|1|A|G|671
5XYU|1|A|U|672
5XYU|1|A|G|673
5XYU|1|A|G|674
5XYU|1|A|A|675
5XYU|1|A|A|676
5XYU|1|A|U|677
5XYU|1|A|G|678
5XYU|1|A|C|679
5XYU|1|A|G|680
5XYU|1|A|C|681
5XYU|1|A|A|682
5XYU|1|A|G|683
5XYU|1|A|A|684
5XYU|1|A|U|685
5XYU|1|A|A|686

Current chains

Chain A

16S RNA

Nearby chains

Chain G

30S ribosomal protein S7

Chain K

30S ribosomal protein S11