HL_5Z56_001
3D structure
- PDB id
- 5Z56 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- cryo-EM structure of a human activated spliceosome (mature Bact) at 5.1 angstrom.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.1 Å
Loop
- Sequence
- GCCUUUUAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5Z56|1|B|G|37
5Z56|1|B|C|38
5Z56|1|B|C|39
5Z56|1|B|U|40
5Z56|1|B|U|41
5Z56|1|B|U|42
5Z56|1|B|U|43
5Z56|1|B|A|44
5Z56|1|B|C|45
Current chains
- Chain B
- U5 snRNA
Nearby chains
- Chain A
- Pre-mRNA-processing-splicing factor 8
- Chain F
- U6 spliceosomal RNA; U6 snRNA
- Chain G
- pre-mRNA
- Chain P
- Spliceosome-associated protein CWC15 homolog
- Chain U
- Serine/arginine repetitive matrix protein 2
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