HL_5ZEB_046

3D structure

PDB id

5ZEB (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. Smegmatis P/P state 70S ribosome structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUCG

Length

4 nucleotides

Bulged bases

5ZEB|1|A|C|1949

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5ZEB_046 not in the Motif Atlas

Geometric match to HL_7KI3_001

Geometric discrepancy: 0.1138

The information below is about HL_7KI3_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

5ZEB|1|A|C|1944
5ZEB|1|A|U|1945
5ZEB|1|A|C|1949
5ZEB|1|A|G|1950

Current chains

Chain A

23S rRNA

Nearby chains