HL_5ZEB_081
3D structure
- PDB id
- 5ZEB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. Smegmatis P/P state 70S ribosome structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UGAGAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_5ZEB_081 not in the Motif Atlas
- Homologous match to HL_4LFB_007
- Geometric discrepancy: 0.0729
- The information below is about HL_4LFB_007
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.3
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 397
Unit IDs
5ZEB|1|a|U|296
5ZEB|1|a|G|297
5ZEB|1|a|A|298
5ZEB|1|a|G|299
5ZEB|1|a|A|300
5ZEB|1|a|G|301
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain d
- 30S ribosomal protein S4
- Chain e
- 30S ribosomal protein S5
- Chain l
- 30S ribosomal protein S12
- Chain q
- 30S ribosomal protein S17
Coloring options: