HL_5ZEP_082

3D structure

PDB id

5ZEP (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis hibernating state 70S ribosome structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GACUGAGAUACGGC

Length

14 nucleotides

Bulged bases

5ZEP|1|a|U|328

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5ZEP|1|a|G|320
5ZEP|1|a|A|321
5ZEP|1|a|C|322
5ZEP|1|a|U|323
5ZEP|1|a|G|324
5ZEP|1|a|A|325
5ZEP|1|a|G|326
5ZEP|1|a|A|327
5ZEP|1|a|U|328
5ZEP|1|a|A|329
5ZEP|1|a|C|330
5ZEP|1|a|G|331
5ZEP|1|a|G|332
5ZEP|1|a|C|333

Current chains

Chain a

16S rRNA

Nearby chains

Chain p

30S ribosomal protein S16

Chain t

30S ribosomal protein S20