HL_5ZEP_083

3D structure

PDB id

5ZEP (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis hibernating state 70S ribosome structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

5ZEP|1|a|A|344

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5ZEP_083 not in the Motif Atlas

Homologous match to HL_4LFB_009

Geometric discrepancy: 0.1228

The information below is about HL_4LFB_009

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.3

Basepair signature

cWW-tSW-F

Number of instances in this motif group

62

Unit IDs

5ZEP|1|a|C|342
5ZEP|1|a|U|343
5ZEP|1|a|A|344
5ZEP|1|a|C|345
5ZEP|1|a|G|346
5ZEP|1|a|G|347

Current chains

Chain a

16S rRNA

Nearby chains

Chain L

50S ribosomal protein L14

Chain Q

50S ribosomal protein L19