HL_5ZEP_110

3D structure

PDB id

5ZEP (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis hibernating state 70S ribosome structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AAAACCACCGUGACCGCACCUUUCGGGGUGUGGCGUUGGUGGGGCU

Length

46 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5ZEP|1|A|A|1563
5ZEP|1|A|A|1564
5ZEP|1|A|A|1565
5ZEP|1|A|A|1566
5ZEP|1|A|C|1567
5ZEP|1|A|C|1568
5ZEP|1|A|A|1569
5ZEP|1|A|C|1570
5ZEP|1|A|C|1571
5ZEP|1|A|G|1572
5ZEP|1|A|U|1573
5ZEP|1|A|G|1574
5ZEP|1|A|A|1575
5ZEP|1|A|C|1576
5ZEP|1|A|C|1577
5ZEP|1|A|G|1578
5ZEP|1|A|C|1579
5ZEP|1|A|A|1580
5ZEP|1|A|C|1581
5ZEP|1|A|C|1582
5ZEP|1|A|U|1583
5ZEP|1|A|U|1584
5ZEP|1|A|U|1585
5ZEP|1|A|C|1586
5ZEP|1|A|G|1587
5ZEP|1|A|G|1588
5ZEP|1|A|G|1589
5ZEP|1|A|G|1590
5ZEP|1|A|U|1591
5ZEP|1|A|G|1592
5ZEP|1|A|U|1593
5ZEP|1|A|G|1594
5ZEP|1|A|G|1595
5ZEP|1|A|C|1596
5ZEP|1|A|G|1597
5ZEP|1|A|U|1598
5ZEP|1|A|U|1599
5ZEP|1|A|G|1600
5ZEP|1|A|G|1601
5ZEP|1|A|U|1602
5ZEP|1|A|G|1603
5ZEP|1|A|G|1604
5ZEP|1|A|G|1605
5ZEP|1|A|G|1606
5ZEP|1|A|C|1607
5ZEP|1|A|U|1608

Current chains

Chain A

23S rRNA

Nearby chains

Chain 0

bS1