HL_5ZET_022

3D structure

PDB id

5ZET (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis P/P state 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AAGAGU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5ZET_022 not in the Motif Atlas

Geometric match to HL_2Y9H_003

Geometric discrepancy: 0.1252

The information below is about HL_2Y9H_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.6

Basepair signature

cWW-F

Number of instances in this motif group

21

Unit IDs

5ZET|1|A|A|755
5ZET|1|A|A|756
5ZET|1|A|G|757
5ZET|1|A|A|758
5ZET|1|A|G|759
5ZET|1|A|U|760

Current chains

Chain A

23S rRNA

Nearby chains

Chain X

50S ribosomal protein L27