HL_5ZET_038

3D structure

PDB id

5ZET (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis P/P state 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UCCAAAACCACCGUGACCGCACCUUUCGGGGUGUGGCGUUGGUGGGGCUGCA

Length

52 nucleotides

Bulged bases

5ZET|1|A|A|1564, 5ZET|1|A|U|1593

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5ZET|1|A|U|1560
5ZET|1|A|C|1561
5ZET|1|A|C|1562
5ZET|1|A|A|1563
5ZET|1|A|A|1564
5ZET|1|A|A|1565
5ZET|1|A|A|1566
5ZET|1|A|C|1567
5ZET|1|A|C|1568
5ZET|1|A|A|1569
5ZET|1|A|C|1570
5ZET|1|A|C|1571
5ZET|1|A|G|1572
5ZET|1|A|U|1573
5ZET|1|A|G|1574
5ZET|1|A|A|1575
5ZET|1|A|C|1576
5ZET|1|A|C|1577
5ZET|1|A|G|1578
5ZET|1|A|C|1579
5ZET|1|A|A|1580
5ZET|1|A|C|1581
5ZET|1|A|C|1582
5ZET|1|A|U|1583
5ZET|1|A|U|1584
5ZET|1|A|U|1585
5ZET|1|A|C|1586
5ZET|1|A|G|1587
5ZET|1|A|G|1588
5ZET|1|A|G|1589
5ZET|1|A|G|1590
5ZET|1|A|U|1591
5ZET|1|A|G|1592
5ZET|1|A|U|1593
5ZET|1|A|G|1594
5ZET|1|A|G|1595
5ZET|1|A|C|1596
5ZET|1|A|G|1597
5ZET|1|A|U|1598
5ZET|1|A|U|1599
5ZET|1|A|G|1600
5ZET|1|A|G|1601
5ZET|1|A|U|1602
5ZET|1|A|G|1603
5ZET|1|A|G|1604
5ZET|1|A|G|1605
5ZET|1|A|G|1606
5ZET|1|A|C|1607
5ZET|1|A|U|1608
5ZET|1|A|G|1609
5ZET|1|A|C|1610
5ZET|1|A|A|1611

Current chains

Chain A

23S rRNA

Nearby chains